Showing posts with label biochemistry. Show all posts
Showing posts with label biochemistry. Show all posts

Saturday, April 21, 2012

Human Genetic Diversity: Functional Consequences for Health and Disease Review

Human Genetic Diversity: Functional Consequences for Health and Disease
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This is a great book for learning more about human genetics. Its diagrams are not always well placed with the text, so it loses one star for lack of clarity. Keep in mind that there is an expected knowledge of basic biology including the cell and its basic DNA-related processes. Good textbook for college-level class.

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The secrets of our genetic heritage are finally being unlocked. The massive scientific effort to sequence the human genome is in fact just the beginning of a long journey as the extraordinary genetic diversity that exists between individuals becomes clear. Work in this field is yielding profound insights into the wider implications for understanding biology, human health and history. It promises much: to understand our evolutionary origins, to define us as individuals, to predict our risk of disease and to more effectively understand, treat and prevent illness. Genetics can help us understand both rare inherited disorders and common multifactorial disease like asthma, heart disease and diabetes. Huge investments are being made and great advances have been achived, but the challenges remain daunting. This book provides an authoritative overview of this topical and very rapidly advancing field of biomedical research. Human Genetic Diversity provides a concise, authoritative overview of human genetic diversity. It documents the insights that human genetics have brought to an understanding of human evolution and history, focusing on the implications of human genetic diversity for disease susceptibility and treatment. The book describes the genetic basis for diseases such as HIV, AIDS, Crohn's disease, asthma and type I diabetes. It also examines the emerging field of pharmacogenomics and individualized medicine. Human genetic variation has implications across a broad range of disciplines (both biological and medical) and this text neatly consolidates work in diverse fields to highlight common themes and principles. An accessible style and the extensive use of illustrations promote its relevance to a broad audience ranging from those interested in human and population genetics to molecular biologists, evolutionary biologists, biological anthropologists and individuals working in the health sciences and clinical medicine.

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Thursday, March 22, 2012

How Genes Influence Behavior Review

How Genes Influence Behavior
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One would expect an introductory textbook by these three scientists to be good, and it is. It covers behavioural and molecular methods, using examples from the authors' own work in psychiatric genetics. The field is put in historical context, with the false turnings explored, as well as the major breakthroughs. The authors take us on a journey through family, adoption and twin studies, on to the history of molecular psychiatric genetics, starting with the early, and usually unreplicated, linkage studies, through genome wide association studies and animal models using rodents and drosophila. Concepts are explained with a minimum of technical and statistical detail, making the book accessible to a wide readership. What sets this book apart from others on this topic are the personal and often witty accounts of doing research. Kendler's anecdote of a family study of schizophrenia in Ireland is particularly engaging, including an encounter with an elderly grandmother who expressed indignation that he should be driving around all over the place interviewing people to find out if mental illness ran in families. "'Why everybody knows that! Take the O'Donnells for example. They are as mad as can be and it goes back generations." (p. 12). One also gets a sense of the hard graft involved in doing research in this area: Kendler estimated that his study took 18 person years just to gather the data, and evidently required persistence and a willingness to work heroically antisocial hours by the research team.
Anyone contemplating a research career in molecular genetics would do well to read the paragraph on p 34-35 debunking popular assumptions about life in the laboratory: "A combination of intelligence and technology applied to taxing but interesting biological problems leads to ground-breaking discoveries that could cure disease or change our understanding of the universe." Well, no. The work is dull, repetitive, and usually unsuccessful. And if after years of work you do find something interesting, your laboratory head will ask: "Why is this finding wrong?". In fact, I suspect only really good laboratory heads do that - the bad ones rush gleefully into print, which is why the field is littered with nonreplicable findings. But as Flint et al point out, you need to ask it because it's embarrassing to publishing something that is wrong, your peers will do their best to find flaws in the work, and, most importantly, "it's only by publishing findings that are robust to any possible criticism that we'll make any progress". A refreshingly old-fashioned take on the scientific process that is all-too-often forgotten in the current climate where we're all encouraged to publish as much as we possibly can, and where a dramatic but non-replicable result may get you two papers in a high-impact journal: one for the original finding, and the other for the failure to replicate.


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How important are genetic influences on behavior?How many genes influence an individual behavior, and how much influence does a single gene have? How do genes interact with the environment to influence the development of behavioral traits?What are the differences between humans and 'simpler' organisms when it comes to the genetic control of behavior? How Genes Influence Behavior is a unique introduction to behavioral genetics, which combines conceptual rigor with accessibility to answer questions such as these--answers that carry important implications for the nature of who we are. Offering unparalleled insights into how behavioral genetics is probed through real-world research, it considers evidence from humans and the major model organisms of mouse, fruit-fly and nematode worm to demonstrate how much of our current understanding of the genetic basis of human behavior stems from our exploration of other animals. Further, it uses these studies to connect the key themes of the book--the nature of gene action, and the inter-relationship of genetic and environmental influences on behavior-across organisms, highlighting key commonalities and differences.The book also shows the major impact that neurobiology is having on our understanding of the field, to give a true depiction of behavioral genetics in the 21st century. However, care is taken throughout not to overwhelm the reader with scientific detail. Instead, the authors make the book fun to read without sacrificing accuracy or devaluing the complexity of the subject matter: they 'personalize' the science, mixing more standard narrative with biographical details to make the subject come alive. With the media filled with talk of the discovery of genes 'for' an array of human behaviors, there has never been a more pressing need for today's students--tomorrow's researchers--to be equipped with a clear, balanced view of the field. How Genes Influence Behavior is the perfect guide for all students, delivered in the words of three researchers who have witnessed first-hand the emergence of this fascinating field, and whose own investigations have been central to our current understanding of it.Online Resource CentreFor Instructors* Figures from the book, available to downloadFor students* Hyperlinks to primary literature cited in the text

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Monday, March 19, 2012

Biomedical Optical Imaging Review

Biomedical Optical Imaging
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You will see what I meant by reading the very first page of this book.
Great contents! But a bit diasppointed!

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Biomedical optical imaging is a rapidly emerging research area with widespread fundamental research and clinical applications. This book gives an overview of biomedical optical imaging with contributions from leading international research groups who have pioneered many of these techniques and applications.A unique research field spanning the microscopic to the macroscopic, biomedical optical imaging allows both structural and functional imaging. Techniques such as confocal and multiphoton microscopy provide cellular level resolution imaging in biological systems. The integration of this technology with exogenous chromophores can selectively enhance contrast for molecular targets as well as supply functional information on processes such as nerve transduction.Novel techniques integrate microscopy with state-of-the-art optics technology, and these include spectral imaging, two photon fluorescence correlation, nonlinear nanoscopy; optical coherence tomography techniques allow functional, dynamic, nanoscale, and cross-sectional visualization. Moving to the macroscopic scale, spectroscopic assessment and imaging methods such as fluorescence and light scattering can provide diagnostics of tissue pathology including neoplastic changes. Techniques using light diffusion and photon migration are a means to explore processes which occur deep inside biological tissues and organs. The integration of these techniques with exogenous probes enables molecular specific sensitivity.

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Sunday, January 29, 2012

Fmoc Solid Phase Peptide Synthesis: A Practical Approach Review

Fmoc Solid Phase Peptide Synthesis: A Practical Approach
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This is a good book for peptide chemist. It has detailed protocol for almost all useful information about Fmoc solid phase peptide synthesis which is used in most of the peptide company, in our company, this book acts as a standard reference for our daily production. I strongly recommend you to buy one if you are or you want to be a peptide chemist.

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In the years since the publication of Atherton and Sheppard's volume, the technique of Fmoc solid-phase peptide synthesis has matured considerably and is now the standard approach for the routine production of peptides. The basic problems outstanding at the time of publication of this earlier work have now been, for the most part, solved. As a result, innovators in the field have focussed their efforts to develop methodologies and chemistry for the synthesis of more complex structures. The focus of this new volume is much broader, and covers not only the essential procedures for the production of linear peptides but also more advanced techniques for preparing cyclic, side-chain modified, phospho- and glycopeptides. Many other methods also deserving attention have been included: convergent peptide synthesis; peptide-protein conjugation; chemoselective ligation; and chemoselective purification. The difficult preparation of cysteine and methionine-containing peptides is also covered, as well as methods for overcoming aggregation during peptide chain assembly and a survey of available automated instrumentation.

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Tuesday, January 10, 2012

The Cell Cycle: An Introduction Review

The Cell Cycle: An Introduction
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Really, you need to read this book. Nowadays nobody can ignore the cell cycle since everything in biology either feeds into the cell cycle, is controlled by the cell cycle, or, in most cases, both. Because the cell cycle is so important, there has been a flood of information about its molecular components, but what this book does is take all that information and place it in context by laying out the overall computational logic of cell cycle control. So, although the book does a great job summarizing the extant data at the time of its writing (which is now a little bit out of date unfortunately), its real value is in providing the conceptual hooks onto which the data can be hung. In this regard, it is still just as effective as it was when it first came out in print, and it is still highly recommended for anyone interested in this subject.

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In the last decade there has been a revolution in our comprehension of how cells grow and divide.Results from experiments on yeast, embryos, and cultured mammalian cells have unified seemingly disparate viewpoints into a single set of principles for normal cellular reproduction in plants, animals and bacteria.Written by two leading participants in that revolution, The Cell Cycle provides the first thorough, authoritative account of the new philosophy of normal cellular reproduction and how it emerged.It is a vivid portrayal of the molecular logic of the cell: how the cell engine induces DNA replication and chromosome replication; how the integrity of genetic information is preserved; and how cell size and environmental signals regulate the cycle of growth and division.By describing important breakthroughs in their historical and experimental context, The Cell Cycle traces the development of the new vision of cell biology and shows its relevance to other areas of modern biology. It is the ideal introduction to the current understanding of cell growth and division for advanced undergraduate and graduate level cell biology courses.

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Saturday, December 31, 2011

Medical Genetics Review

Medical Genetics
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A gem. Information about genetics is very very well presented. I recommend this book to everyone who use the word genetic, as science of genetics is the future that is upon us now. Be better informed.
Tariq Ahmed, MD MPH , Kirkland, WA.

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Highly Commended in the 2006 BMA Medical Book Competition (Basic and clinical sciences)Medical Geneticsprovides medical and biomedical science students with an understanding of the basic principles of human genetics as they relate to clinical practice. Each of the initial chapters focuses on a traditional cornerstone of human genetics (molecular genetics, cytogenetics, Mendelian inheritance, polygenic inheritance, population genetics) with a major emphasis on clinical relevance. These are followed by consideration of subjects of specific medical importance such as the haemoglobinopathies, developmental genetics, cancer genetics and pharmacogenetics, with due attention to topical and evolving issues such as pharmacogenomics, gene therapy and therapeutic cloning. The final chapters provide an explanation of the genetically related clinical skills and competencies expected of a medical student, together with an overview of the principles of clinical genetics, a rapidly developing clinical specialty which now impinges on almost every aspect of medical practice. Online Resource CentreMedical Genetics is accompanied by an extensive Online Resource Centre, which offers a wealth of additional materials, including:DT Multiple Choice Questions and Extended Matching Questions, to help you test your knowledge of each chapter of the book DTHyperlinked bibliography offering direct links to online articles cited in the book DTCase Celebres: additional case celebres to those in the book DTOMIM Database Links, providing hyperlinks to the NIH's database of genetic diseases DTPedigree Examples, giving guidance on constructing family trees DTBonus material from other seminal genetics titles published by Oxford University Press

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Friday, December 16, 2011

Biomechanics: Concepts and Computation (Cambridge Texts in Biomedical Engineering) Review

Biomechanics: Concepts and Computation (Cambridge Texts in Biomedical Engineering)
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The product arrived in the time that it said it would. The book was brand new and much more affordable than the ones at the book store found on my campus. I saved a ton of money by buying this online.

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This is the first textbook that integrates both general and specific topics, theoretical background and biomedical engineering applications, as well as analytical and numerical approaches. This quantitative approach integrates the classical concepts of mechanics and computational modelling techniques, in a logical progression through a wide range of fundamental biomechanics principles. Online MATLAB-based software along with examples and problems using biomedical applications will motivate undergraduate biomedical engineering students to practice and test their skills. The book covers topics such as kinematics, equilibrium, stresses and strains, and also focuses on large deformations and rotations and non-linear constitutive equations, including visco-elastic behaviour and the behaviour of long slender fibre-like structures. This is the definitive textbook for students.

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Thursday, December 15, 2011

Molecular Evolution and Phylogenetics Review

Molecular Evolution and Phylogenetics
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Nei and Kumar's "Molecular Evolution and Phylogenetics" is basically an updated version of Nei's 1987 "Molecular Evolutionary Genetics" book. Accordingly, attention is shifted to reviewing many recent advances in methods of phylogenetic inference with an obvious bias towards distance methods, particularly those which the senior author devised. In fairness, they give decent coverage to the more popular parsimony and likelihood methods as well. The great strength of the book is the number of real examples used to illustrate properties of the methods, and their focus on statistical methodology without miring the reader in detailed mathematics. The disappointment is that while breadth of coverage is tolerable, depth is lacking. Expanding their views on the shortcomings of likelihood in choosing tree topology and likelihood ratio-tests in choosing models of sequence evolution would have been most enlightening, particularly as these issues have been brushed lightly aside by phylo-likelihoodists. Other methods (Hadamard transformations, Bayesian phylogenetic inference) were absent altogether. Further the chapter on molecular clocks was disappointing--old 1980s controversies were rehashed, while there was nothing on methods that relax the assumption of rate constancy while still allowing divergences to be dated. Admittedly some of this is very new and research is ongoing, but there isn't even a hint of these developments in this chapter. Another plus though is the addition of a chapter on inferring ancestral states of molecular sequences.
Unlike Molecular Evolutionary Genetics, far too little of the book is devoted to methods at the population level, and what is there again smacks of state-of-the-art 15-20 years ago. I was hoping for much more coverage of microsatellite and AFLP data. There was very little for either, while now rarely-used RFLPs were given extensive coverage.
In short, this book was too short, particularly for the price, and I almost gave it 3 stars rather than 4. However, if you are a phylogeneticist, you will probably want to have this book on your shelf. A lighter introduction for the uninitiated would be Rod Page's "Molecular Evolution" or Graur and Li's "Fundamentals of Molecular Evolution". However, my hopes for a good comprehensive text and reference on phylogenetic methods now rest on publication of Joseph Felsenstein's "Inferring Phylogenies".

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During the last ten years, remarkable progress has occurred in the study of molecular evolution. Among the most important factors that are responsible for this progress are the development of new statistical methods and advances in computational technology. In particular, phylogenetic analysis of DNA or protein sequences has become a powerful tool for studying molecular evolution. Along with this developing technology, the application of the new statistical and computational methods has become more complicated and there is no comprehensive volume that treats these methods in depth. Molecular Evolution and Phylogenetics fills this gap and present various statistical methods that are easily accessible to general biologists as well as biochemists, bioinformatists and graduate students. The text covers measurement of sequence divergence, construction of phylogenetic trees, statistical tests for detection of positive Darwinian selection, inference of ancestral amino acid sequences, construction of linearized trees, and analysis of allele frequency data. Emphasis is given to practical methods of data analysis, and methods can be learned by working through numerical examples using the computer program MEGA2 that is provided.

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Monday, October 10, 2011

The Antimicrobial Drugs Review

The Antimicrobial Drugs
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This book has great information on antimicrobial drugs. It is what is allowing me to pass (I hope) my chemotherapeutics class. While the information is presented well it was published in 2000 and drug resistance has changed in 8 years, and new drugs have been released. I hope Scholar/Pratt release a third edition. Overall an oldie but a goodie.

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The is the third edition of a text that surveys the drugs used to treat bacterial, fungal, prarsitic, and viral infections. This book contains comprehensive presentations of the mechanisms for both the antimicrobial actions and for the adverse clinical effects of these drugs. Complete discussions of the pharmacology are highlighted by numerous charts and tables summarizing each drug's pharmacokinetic properties and microbial susceptibility. With 3500 reference citations, The Anitmicrobial Drugs provides a complete entry into the literature, making it an invaluable resource for infectious disease specialists, clinical pharmacists, clinical microbiologists, medical students, pharmacy students, and graduate students in pharmacology and microbiology.

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Saturday, August 20, 2011

Nature's Robots: A History of Proteins (Oxford Paperbacks) Review

Nature's Robots: A History of Proteins (Oxford Paperbacks)
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People who say that History of Science is boring haven't read this excellent book. This book is lively, entertaining and unbiased. While you can find dozens of accounts of the history of chemistry or physics, protein biochemistry has been overlooked for way too long. It was worth the wait though! As the proud owner of some of the material cited in this book (particularly on the history of enzymes), I had a blast reading "Nature's Robots". Read it and then go out and buy "Mendeleyeff's dream", they complement each other beautifully

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